Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdkn2bP55271 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.07■□□□□ 0.32
Cdkn2bP55271 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.07■□□□□ 0.32
Cdkn2bP55271 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.07■□□□□ 0.32
Cdkn2bP55271 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.07■□□□□ 0.32
Cdkn2bP55271 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdkn2bP55271 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.06■□□□□ 0.32
Cdkn2bP55271 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdkn2bP55271 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdkn2bP55271 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.05■□□□□ 0.32
Cdkn2bP55271 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdkn2bP55271 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Gm7514-201ENSMUST00000209475 934 ntBASIC17.05■□□□□ 0.32
Cdkn2bP55271 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdkn2bP55271 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkn2bP55271 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.04■□□□□ 0.32
Cdkn2bP55271 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.04■□□□□ 0.32
Cdkn2bP55271 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkn2bP55271 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkn2bP55271 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms