Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NcanP55066 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NcanP55066 Gm43438-201ENSMUST00000198133 379 ntBASIC18.86■□□□□ 0.61
NcanP55066 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.86■□□□□ 0.61
NcanP55066 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NcanP55066 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
NcanP55066 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NcanP55066 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NcanP55066 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NcanP55066 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NcanP55066 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NcanP55066 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.84■□□□□ 0.61
NcanP55066 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NcanP55066 Gm13401-201ENSMUST00000117074 291 ntBASIC18.84■□□□□ 0.61
NcanP55066 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.84■□□□□ 0.61
NcanP55066 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NcanP55066 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
NcanP55066 Gm27459-201ENSMUST00000184860 107 ntBASIC18.84■□□□□ 0.61
NcanP55066 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
NcanP55066 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.84■□□□□ 0.61
NcanP55066 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NcanP55066 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.84■□□□□ 0.61
NcanP55066 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NcanP55066 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NcanP55066 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NcanP55066 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NcanP55066 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.83■□□□□ 0.6
NcanP55066 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.83■□□□□ 0.6
NcanP55066 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.83■□□□□ 0.6
NcanP55066 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NcanP55066 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NcanP55066 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NcanP55066 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.83■□□□□ 0.6
NcanP55066 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.82■□□□□ 0.6
NcanP55066 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NcanP55066 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NcanP55066 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NcanP55066 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NcanP55066 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NcanP55066 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.82■□□□□ 0.6
NcanP55066 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NcanP55066 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NcanP55066 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NcanP55066 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.81■□□□□ 0.6
NcanP55066 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
NcanP55066 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NcanP55066 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.8■□□□□ 0.6
NcanP55066 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NcanP55066 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NcanP55066 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.8■□□□□ 0.6
NcanP55066 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NcanP55066 Gm37722-201ENSMUST00000193757 208 ntBASIC18.8■□□□□ 0.6
NcanP55066 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms