Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lbx1P52955 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lbx1P52955 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lbx1P52955 Mir770-201ENSMUST00000103252 94 ntBASIC17.23■□□□□ 0.35
Lbx1P52955 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lbx1P52955 Gm12895-201ENSMUST00000122214 226 ntBASIC17.23■□□□□ 0.35
Lbx1P52955 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Gm5364-201ENSMUST00000216789 889 ntBASIC17.23■□□□□ 0.35
Lbx1P52955 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.23■□□□□ 0.35
Lbx1P52955 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lbx1P52955 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lbx1P52955 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
Lbx1P52955 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.22■□□□□ 0.35
Lbx1P52955 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Lbx1P52955 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lbx1P52955 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.22■□□□□ 0.35
Lbx1P52955 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.22■□□□□ 0.35
Lbx1P52955 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.22■□□□□ 0.35
Lbx1P52955 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lbx1P52955 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lbx1P52955 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lbx1P52955 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.21■□□□□ 0.35
Lbx1P52955 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lbx1P52955 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lbx1P52955 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lbx1P52955 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Gm11779-201ENSMUST00000118541 368 ntBASIC17.2■□□□□ 0.34
Lbx1P52955 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Lbx1P52955 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lbx1P52955 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lbx1P52955 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lbx1P52955 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.2■□□□□ 0.34
Lbx1P52955 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lbx1P52955 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lbx1P52955 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lbx1P52955 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lbx1P52955 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lbx1P52955 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lbx1P52955 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
Lbx1P52955 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.18■□□□□ 0.34
Lbx1P52955 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.18■□□□□ 0.34
Lbx1P52955 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.18■□□□□ 0.34
Lbx1P52955 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.18■□□□□ 0.34
Lbx1P52955 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lbx1P52955 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.17■□□□□ 0.34
Lbx1P52955 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lbx1P52955 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.17■□□□□ 0.34
Lbx1P52955 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.17■□□□□ 0.34
Lbx1P52955 Mir5131-201ENSMUST00000175426 93 ntBASIC17.17■□□□□ 0.34
Lbx1P52955 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Lbx1P52955 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lbx1P52955 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lbx1P52955 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lbx1P52955 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.16■□□□□ 0.34
Lbx1P52955 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms