Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TubP50586 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.25■□□□□ 0.51
TubP50586 Mir2861-201ENSMUST00000175539 82 ntBASIC18.25■□□□□ 0.51
TubP50586 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.25■□□□□ 0.51
TubP50586 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TubP50586 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TubP50586 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TubP50586 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TubP50586 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TubP50586 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.24■□□□□ 0.51
TubP50586 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TubP50586 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TubP50586 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
TubP50586 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TubP50586 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.23■□□□□ 0.51
TubP50586 Gm15378-201ENSMUST00000121894 207 ntBASIC18.23■□□□□ 0.51
TubP50586 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Gm10698-201ENSMUST00000182663 604 ntBASIC18.23■□□□□ 0.51
TubP50586 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.23■□□□□ 0.51
TubP50586 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.23■□□□□ 0.51
TubP50586 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.23■□□□□ 0.51
TubP50586 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TubP50586 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TubP50586 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
TubP50586 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TubP50586 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.22■□□□□ 0.51
TubP50586 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TubP50586 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TubP50586 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.22■□□□□ 0.51
TubP50586 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.22■□□□□ 0.51
TubP50586 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TubP50586 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.22■□□□□ 0.51
TubP50586 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TubP50586 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TubP50586 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TubP50586 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TubP50586 Gm42545-201ENSMUST00000202755 922 ntBASIC18.21■□□□□ 0.51
TubP50586 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.21■□□□□ 0.51
TubP50586 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.21■□□□□ 0.51
TubP50586 Gm18025-201ENSMUST00000221733 862 ntBASIC18.21■□□□□ 0.51
TubP50586 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TubP50586 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TubP50586 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TubP50586 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TubP50586 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.2■□□□□ 0.5
TubP50586 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TubP50586 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.2■□□□□ 0.5
TubP50586 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TubP50586 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TubP50586 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TubP50586 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms