Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt6aP50446 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt6aP50446 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt6aP50446 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.71■□□□□ 0.43
Krt6aP50446 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.71■□□□□ 0.43
Krt6aP50446 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt6aP50446 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Krt6aP50446 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Krt6aP50446 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Krt6aP50446 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Krt6aP50446 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.7■□□□□ 0.42
Krt6aP50446 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.7■□□□□ 0.42
Krt6aP50446 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Krt6aP50446 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.7■□□□□ 0.42
Krt6aP50446 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Krt6aP50446 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Krt6aP50446 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt6aP50446 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.69■□□□□ 0.42
Krt6aP50446 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.69■□□□□ 0.42
Krt6aP50446 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Krt6aP50446 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.69■□□□□ 0.42
Krt6aP50446 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Gm10493-201ENSMUST00000097270 612 ntBASIC17.69■□□□□ 0.42
Krt6aP50446 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Krt6aP50446 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Krt6aP50446 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Krt6aP50446 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Krt6aP50446 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Krt6aP50446 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Krt6aP50446 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Krt6aP50446 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Krt6aP50446 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Krt6aP50446 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Krt6aP50446 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Krt6aP50446 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.67■□□□□ 0.42
Krt6aP50446 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.67■□□□□ 0.42
Krt6aP50446 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.67■□□□□ 0.42
Krt6aP50446 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.67■□□□□ 0.42
Krt6aP50446 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.67■□□□□ 0.42
Krt6aP50446 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Krt6aP50446 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.67■□□□□ 0.42
Krt6aP50446 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Krt6aP50446 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Idnk-204ENSMUST00000226010 1898 ntBASIC17.66■□□□□ 0.42
Krt6aP50446 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Krt6aP50446 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Krt6aP50446 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.65■□□□□ 0.42
Krt6aP50446 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.65■□□□□ 0.42
Krt6aP50446 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt6aP50446 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms