Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.81□□□□□ -0.04
Nkx2-1P50220 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-1P50220 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Smad6-203ENSMUST00000179458 273 ntBASIC14.8□□□□□ -0.04
Nkx2-1P50220 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.8□□□□□ -0.04
Nkx2-1P50220 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.8□□□□□ -0.04
Nkx2-1P50220 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-1P50220 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Gm43173-201ENSMUST00000202246 593 ntBASIC14.79□□□□□ -0.04
Nkx2-1P50220 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-1P50220 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Gm45417-201ENSMUST00000209533 758 ntBASIC14.78□□□□□ -0.04
Nkx2-1P50220 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Gm6139-201ENSMUST00000079261 882 ntBASIC14.78□□□□□ -0.04
Nkx2-1P50220 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-1P50220 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-1P50220 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nkx2-1P50220 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-1P50220 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.77□□□□□ -0.05
Nkx2-1P50220 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.76□□□□□ -0.05
Nkx2-1P50220 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-1P50220 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms