Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.76□□□□□ -0.05
Abca1P41233 Gm23634-201ENSMUST00000175071 91 ntBASIC14.76□□□□□ -0.05
Abca1P41233 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.76□□□□□ -0.05
Abca1P41233 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Abca1P41233 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Abca1P41233 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Gm10517-202ENSMUST00000192970 758 ntBASIC14.75□□□□□ -0.05
Abca1P41233 Gm42545-201ENSMUST00000202755 922 ntBASIC14.75□□□□□ -0.05
Abca1P41233 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Abca1P41233 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Abca1P41233 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.75□□□□□ -0.05
Abca1P41233 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Abca1P41233 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.74□□□□□ -0.05
Abca1P41233 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Abca1P41233 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Abca1P41233 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Abca1P41233 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Abca1P41233 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca1P41233 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Gm15375-201ENSMUST00000119510 849 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abca1P41233 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca1P41233 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.73□□□□□ -0.05
Abca1P41233 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Abca1P41233 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.72□□□□□ -0.05
Abca1P41233 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.72□□□□□ -0.05
Abca1P41233 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Abca1P41233 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca1P41233 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.71□□□□□ -0.05
Abca1P41233 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca1P41233 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms