Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox6P40645 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox6P40645 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox6P40645 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sox6P40645 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox6P40645 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox6P40645 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox6P40645 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sox6P40645 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Sox6P40645 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox6P40645 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox6P40645 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sox6P40645 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox6P40645 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.73■□□□□ 0.27
Sox6P40645 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox6P40645 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.72■□□□□ 0.27
Sox6P40645 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.72■□□□□ 0.27
Sox6P40645 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Gm7291-201ENSMUST00000199147 382 ntBASIC16.72■□□□□ 0.27
Sox6P40645 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox6P40645 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sox6P40645 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox6P40645 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Gm6420-201ENSMUST00000193885 723 ntBASIC16.71■□□□□ 0.27
Sox6P40645 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.71■□□□□ 0.27
Sox6P40645 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox6P40645 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.71■□□□□ 0.27
Sox6P40645 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sox6P40645 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Sox6P40645 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.7■□□□□ 0.26
Sox6P40645 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox6P40645 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox6P40645 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Sox6P40645 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.7■□□□□ 0.26
Sox6P40645 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox6P40645 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox6P40645 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox6P40645 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Sox6P40645 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox6P40645 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox6P40645 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.69■□□□□ 0.26
Sox6P40645 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox6P40645 Nespas-201ENSMUST00000143738 1083 ntBASIC16.69■□□□□ 0.26
Sox6P40645 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.69■□□□□ 0.26
Sox6P40645 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox6P40645 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms