Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Thbs1P35441 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.46■□□□□ 0.23
Thbs1P35441 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.46■□□□□ 0.23
Thbs1P35441 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.46■□□□□ 0.23
Thbs1P35441 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.46■□□□□ 0.23
Thbs1P35441 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Thbs1P35441 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.46■□□□□ 0.23
Thbs1P35441 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Thbs1P35441 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Thbs1P35441 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.45■□□□□ 0.22
Thbs1P35441 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.45■□□□□ 0.22
Thbs1P35441 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Thbs1P35441 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Thbs1P35441 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.45■□□□□ 0.22
Thbs1P35441 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Thbs1P35441 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.44■□□□□ 0.22
Thbs1P35441 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.44■□□□□ 0.22
Thbs1P35441 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Thbs1P35441 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Thbs1P35441 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.43■□□□□ 0.22
Thbs1P35441 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.43■□□□□ 0.22
Thbs1P35441 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.43■□□□□ 0.22
Thbs1P35441 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.43■□□□□ 0.22
Thbs1P35441 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Thbs1P35441 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Thbs1P35441 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Thbs1P35441 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Thbs1P35441 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Thbs1P35441 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Thbs1P35441 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Thbs1P35441 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Thbs1P35441 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.42■□□□□ 0.22
Thbs1P35441 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.42■□□□□ 0.22
Thbs1P35441 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Thbs1P35441 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Thbs1P35441 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Thbs1P35441 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Thbs1P35441 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.41■□□□□ 0.22
Thbs1P35441 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Thbs1P35441 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Thbs1P35441 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thbs1P35441 Gm10418-201ENSMUST00000100943 576 ntBASIC16.41■□□□□ 0.22
Thbs1P35441 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Thbs1P35441 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms