Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.75■□□□□ 0.43
Nckap1P28660 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nckap1P28660 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Nckap1P28660 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Nckap1P28660 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nckap1P28660 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
Nckap1P28660 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 BC021767-201ENSMUST00000126387 1716 ntBASIC17.73■□□□□ 0.43
Nckap1P28660 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nckap1P28660 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.73■□□□□ 0.43
Nckap1P28660 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nckap1P28660 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.72■□□□□ 0.43
Nckap1P28660 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nckap1P28660 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nckap1P28660 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.72■□□□□ 0.43
Nckap1P28660 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Nckap1P28660 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nckap1P28660 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Mir2861-201ENSMUST00000175539 82 ntBASIC17.71■□□□□ 0.43
Nckap1P28660 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nckap1P28660 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nckap1P28660 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.7■□□□□ 0.42
Nckap1P28660 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.7■□□□□ 0.42
Nckap1P28660 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nckap1P28660 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nckap1P28660 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Gm3375-201ENSMUST00000203929 796 ntBASIC17.69■□□□□ 0.42
Nckap1P28660 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.69■□□□□ 0.42
Nckap1P28660 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nckap1P28660 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.69■□□□□ 0.42
Nckap1P28660 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nckap1P28660 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.68■□□□□ 0.42
Nckap1P28660 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nckap1P28660 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nckap1P28660 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Nckap1P28660 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nckap1P28660 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nckap1P28660 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Nckap1P28660 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nckap1P28660 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.67■□□□□ 0.42
Nckap1P28660 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms