Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04213 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P04213 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P04213 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04213 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04213 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04213 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P04213 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.09■□□□□ 0.33
P04213 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.09■□□□□ 0.33
P04213 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.09■□□□□ 0.33
P04213 Rab3c-203ENSMUST00000224180 967 ntBASIC17.09■□□□□ 0.33
P04213 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Zfp783-201ENSMUST00000095946 670 ntBASIC17.09■□□□□ 0.33
P04213 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.09■□□□□ 0.33
P04213 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.09■□□□□ 0.33
P04213 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04213 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04213 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04213 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04213 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04213 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
P04213 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.08■□□□□ 0.32
P04213 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P04213 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04213 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P04213 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04213 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04213 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04213 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.07■□□□□ 0.32
P04213 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.07■□□□□ 0.32
P04213 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.07■□□□□ 0.32
P04213 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P04213 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P04213 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.07■□□□□ 0.32
P04213 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04213 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P04213 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.07■□□□□ 0.32
P04213 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.06■□□□□ 0.32
P04213 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.06■□□□□ 0.32
P04213 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04213 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04213 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P04213 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.05■□□□□ 0.32
P04213 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.05■□□□□ 0.32
P04213 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.05■□□□□ 0.32
P04213 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.05■□□□□ 0.32
P04213 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.05■□□□□ 0.32
P04213 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
P04213 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
P04213 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.05■□□□□ 0.32
P04213 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04213 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04213 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms