Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.37■□□□□ 0.69
P01734 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
P01734 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.36■□□□□ 0.69
P01734 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.36■□□□□ 0.69
P01734 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.36■□□□□ 0.69
P01734 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.36■□□□□ 0.69
P01734 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01734 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P01734 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P01734 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.35■□□□□ 0.69
P01734 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Gm12382-201ENSMUST00000122005 922 ntBASIC19.35■□□□□ 0.69
P01734 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P01734 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.35■□□□□ 0.69
P01734 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
P01734 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
P01734 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P01734 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01734 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.35■□□□□ 0.69
P01734 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.34■□□□□ 0.69
P01734 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.34■□□□□ 0.69
P01734 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01734 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
P01734 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01734 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
P01734 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01734 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01734 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01734 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01734 Gm715-201ENSMUST00000117865 831 ntBASIC19.33■□□□□ 0.68
P01734 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
P01734 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.33■□□□□ 0.68
P01734 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.33■□□□□ 0.68
P01734 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.33■□□□□ 0.68
P01734 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
P01734 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01734 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.32■□□□□ 0.68
P01734 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.32■□□□□ 0.68
P01734 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.32■□□□□ 0.68
P01734 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01734 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01734 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms