Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifnb1P01575 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ifnb1P01575 Idnk-204ENSMUST00000226010 1898 ntBASIC18.81■□□□□ 0.6
Ifnb1P01575 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifnb1P01575 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ifnb1P01575 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifnb1P01575 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifnb1P01575 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.81■□□□□ 0.6
Ifnb1P01575 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ifnb1P01575 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ifnb1P01575 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ifnb1P01575 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Gm15039-201ENSMUST00000118914 875 ntBASIC18.8■□□□□ 0.6
Ifnb1P01575 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ifnb1P01575 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.8■□□□□ 0.6
Ifnb1P01575 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ifnb1P01575 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ifnb1P01575 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.79■□□□□ 0.6
Ifnb1P01575 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ifnb1P01575 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ifnb1P01575 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.79■□□□□ 0.6
Ifnb1P01575 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ifnb1P01575 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.79■□□□□ 0.6
Ifnb1P01575 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ifnb1P01575 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ifnb1P01575 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Zfp783-201ENSMUST00000095946 670 ntBASIC18.78■□□□□ 0.6
Ifnb1P01575 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Ifnb1P01575 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Ifnb1P01575 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ifnb1P01575 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.78■□□□□ 0.6
Ifnb1P01575 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifnb1P01575 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ifnb1P01575 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Gm8969-201ENSMUST00000199694 526 ntBASIC18.77■□□□□ 0.6
Ifnb1P01575 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifnb1P01575 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifnb1P01575 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifnb1P01575 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.59
Ifnb1P01575 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifnb1P01575 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifnb1P01575 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifnb1P01575 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.76■□□□□ 0.59
Ifnb1P01575 Gm5408-201ENSMUST00000197998 747 ntBASIC18.76■□□□□ 0.59
Ifnb1P01575 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.76■□□□□ 0.59
Ifnb1P01575 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ifnb1P01575 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.75■□□□□ 0.59
Ifnb1P01575 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms