Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.06■□□□□ 0.32
Hcn3O88705 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Hcn3O88705 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hcn3O88705 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.06■□□□□ 0.32
Hcn3O88705 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hcn3O88705 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Hcn3O88705 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Hcn3O88705 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.06■□□□□ 0.32
Hcn3O88705 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hcn3O88705 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.05■□□□□ 0.32
Hcn3O88705 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.05■□□□□ 0.32
Hcn3O88705 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
Hcn3O88705 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hcn3O88705 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hcn3O88705 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.04■□□□□ 0.32
Hcn3O88705 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.04■□□□□ 0.32
Hcn3O88705 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hcn3O88705 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.04■□□□□ 0.32
Hcn3O88705 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.04■□□□□ 0.32
Hcn3O88705 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hcn3O88705 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.04■□□□□ 0.32
Hcn3O88705 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Hcn3O88705 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hcn3O88705 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
Hcn3O88705 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Hcn3O88705 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.03■□□□□ 0.32
Hcn3O88705 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.03■□□□□ 0.32
Hcn3O88705 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hcn3O88705 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hcn3O88705 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hcn3O88705 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.02■□□□□ 0.32
Hcn3O88705 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hcn3O88705 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.02■□□□□ 0.32
Hcn3O88705 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hcn3O88705 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms