Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.25■□□□□ 0.03
Cldn1O88551 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Cldn1O88551 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cldn1O88551 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cldn1O88551 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cldn1O88551 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cldn1O88551 Gm33142-201ENSMUST00000193913 867 ntBASIC15.24■□□□□ 0.03
Cldn1O88551 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldn1O88551 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 AA414768-201ENSMUST00000121924 1257 ntBASIC15.23■□□□□ 0.03
Cldn1O88551 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.23■□□□□ 0.03
Cldn1O88551 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cldn1O88551 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldn1O88551 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cldn1O88551 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cldn1O88551 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Gm18959-201ENSMUST00000208954 655 ntBASIC15.22■□□□□ 0.03
Cldn1O88551 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.22■□□□□ 0.03
Cldn1O88551 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldn1O88551 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cldn1O88551 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cldn1O88551 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.21■□□□□ 0.03
Cldn1O88551 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.21■□□□□ 0.03
Cldn1O88551 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cldn1O88551 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldn1O88551 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldn1O88551 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldn1O88551 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldn1O88551 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.21■□□□□ 0.02
Cldn1O88551 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldn1O88551 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cldn1O88551 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cldn1O88551 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldn1O88551 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms