Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.47■□□□□ 0.39
Cdh16O88338 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdh16O88338 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdh16O88338 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cdh16O88338 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdh16O88338 Gm27801-201ENSMUST00000184174 223 ntBASIC17.46■□□□□ 0.39
Cdh16O88338 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.46■□□□□ 0.39
Cdh16O88338 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdh16O88338 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdh16O88338 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdh16O88338 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Tgds-204ENSMUST00000228543 1594 ntBASIC17.45■□□□□ 0.38
Cdh16O88338 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cdh16O88338 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Gm26833-201ENSMUST00000180899 440 ntBASIC17.45■□□□□ 0.38
Cdh16O88338 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cdh16O88338 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.45■□□□□ 0.38
Cdh16O88338 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdh16O88338 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdh16O88338 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cdh16O88338 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cdh16O88338 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdh16O88338 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.43■□□□□ 0.38
Cdh16O88338 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.43■□□□□ 0.38
Cdh16O88338 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.43■□□□□ 0.38
Cdh16O88338 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.43■□□□□ 0.38
Cdh16O88338 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdh16O88338 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cdh16O88338 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Cdh16O88338 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.42■□□□□ 0.38
Cdh16O88338 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Gm43017-201ENSMUST00000198296 752 ntBASIC17.42■□□□□ 0.38
Cdh16O88338 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cdh16O88338 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdh16O88338 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cdh16O88338 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms