Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Gm7791-201ENSMUST00000219066 539 ntBASIC19.68■□□□□ 0.74
Trdmt1O55055 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.68■□□□□ 0.74
Trdmt1O55055 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Trdmt1O55055 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trdmt1O55055 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trdmt1O55055 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trdmt1O55055 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Trdmt1O55055 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trdmt1O55055 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trdmt1O55055 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.66■□□□□ 0.74
Trdmt1O55055 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trdmt1O55055 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trdmt1O55055 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trdmt1O55055 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trdmt1O55055 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trdmt1O55055 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trdmt1O55055 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.64■□□□□ 0.73
Trdmt1O55055 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trdmt1O55055 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trdmt1O55055 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trdmt1O55055 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trdmt1O55055 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trdmt1O55055 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Trdmt1O55055 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.64■□□□□ 0.73
Trdmt1O55055 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trdmt1O55055 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trdmt1O55055 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trdmt1O55055 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Gm13474-201ENSMUST00000122466 815 ntBASIC19.63■□□□□ 0.73
Trdmt1O55055 Gm29791-202ENSMUST00000207888 369 ntBASIC19.63■□□□□ 0.73
Trdmt1O55055 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.63■□□□□ 0.73
Trdmt1O55055 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trdmt1O55055 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Trdmt1O55055 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.62■□□□□ 0.73
Trdmt1O55055 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.62■□□□□ 0.73
Trdmt1O55055 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.62■□□□□ 0.73
Trdmt1O55055 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trdmt1O55055 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trdmt1O55055 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.61■□□□□ 0.73
Trdmt1O55055 Gm25016-201ENSMUST00000158399 131 ntBASIC19.61■□□□□ 0.73
Trdmt1O55055 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trdmt1O55055 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms