Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Npc1O35604 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Npc1O35604 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Npc1O35604 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Npc1O35604 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Npc1O35604 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Npc1O35604 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.37■□□□□ 0.37
Npc1O35604 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.37■□□□□ 0.37
Npc1O35604 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.37■□□□□ 0.37
Npc1O35604 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.37■□□□□ 0.37
Npc1O35604 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.37■□□□□ 0.37
Npc1O35604 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Npc1O35604 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Npc1O35604 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Npc1O35604 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.36■□□□□ 0.37
Npc1O35604 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Npc1O35604 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Npc1O35604 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Npc1O35604 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Npc1O35604 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.35■□□□□ 0.37
Npc1O35604 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.35■□□□□ 0.37
Npc1O35604 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Npc1O35604 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.35■□□□□ 0.37
Npc1O35604 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Npc1O35604 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Npc1O35604 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Npc1O35604 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Npc1O35604 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Npc1O35604 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.34■□□□□ 0.37
Npc1O35604 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.34■□□□□ 0.37
Npc1O35604 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Npc1O35604 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Npc1O35604 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Npc1O35604 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Npc1O35604 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Npc1O35604 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Npc1O35604 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Npc1O35604 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Npc1O35604 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Npc1O35604 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.33■□□□□ 0.36
Npc1O35604 Mir6349-201ENSMUST00000184059 97 ntBASIC17.33■□□□□ 0.36
Npc1O35604 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.33■□□□□ 0.36
Npc1O35604 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Npc1O35604 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Npc1O35604 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Npc1O35604 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Npc1O35604 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Npc1O35604 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Npc1O35604 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Npc1O35604 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.32■□□□□ 0.36
Npc1O35604 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.32■□□□□ 0.36
Npc1O35604 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms