Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clk4O35493 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.09■□□□□ 0.33
Clk4O35493 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clk4O35493 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Clk4O35493 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Clk4O35493 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk4O35493 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.08■□□□□ 0.33
Clk4O35493 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.08■□□□□ 0.33
Clk4O35493 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Clk4O35493 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk4O35493 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk4O35493 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clk4O35493 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clk4O35493 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.08■□□□□ 0.32
Clk4O35493 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.08■□□□□ 0.32
Clk4O35493 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clk4O35493 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clk4O35493 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clk4O35493 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.07■□□□□ 0.32
Clk4O35493 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.07■□□□□ 0.32
Clk4O35493 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clk4O35493 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clk4O35493 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.07■□□□□ 0.32
Clk4O35493 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clk4O35493 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.06■□□□□ 0.32
Clk4O35493 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.06■□□□□ 0.32
Clk4O35493 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.06■□□□□ 0.32
Clk4O35493 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clk4O35493 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clk4O35493 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clk4O35493 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Gm12527-201ENSMUST00000117967 564 ntBASIC17.05■□□□□ 0.32
Clk4O35493 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.05■□□□□ 0.32
Clk4O35493 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.05■□□□□ 0.32
Clk4O35493 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.05■□□□□ 0.32
Clk4O35493 Gm20760-201ENSMUST00000179197 648 ntBASIC17.05■□□□□ 0.32
Clk4O35493 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clk4O35493 Zfp783-201ENSMUST00000095946 670 ntBASIC17.05■□□□□ 0.32
Clk4O35493 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.05■□□□□ 0.32
Clk4O35493 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.05■□□□□ 0.32
Clk4O35493 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk4O35493 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Clk4O35493 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Clk4O35493 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Clk4O35493 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Gm38285-201ENSMUST00000192928 922 ntBASIC17.04■□□□□ 0.32
Clk4O35493 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.04■□□□□ 0.32
Clk4O35493 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk4O35493 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms