Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clk3O35492 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Clk3O35492 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
Clk3O35492 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk3O35492 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.94■□□□□ 0.3
Clk3O35492 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clk3O35492 Gm7290-201ENSMUST00000104990 617 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clk3O35492 Gm12918-201ENSMUST00000120234 636 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Gm15710-201ENSMUST00000121821 636 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Gm5075-201ENSMUST00000196916 622 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Gm6365-201ENSMUST00000054711 744 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.94■□□□□ 0.3
Clk3O35492 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clk3O35492 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk3O35492 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clk3O35492 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.93■□□□□ 0.3
Clk3O35492 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.93■□□□□ 0.3
Clk3O35492 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Clk3O35492 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.93■□□□□ 0.3
Clk3O35492 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk3O35492 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.93■□□□□ 0.3
Clk3O35492 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Clk3O35492 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clk3O35492 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.92■□□□□ 0.3
Clk3O35492 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.92■□□□□ 0.3
Clk3O35492 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clk3O35492 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk3O35492 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clk3O35492 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.91■□□□□ 0.3
Clk3O35492 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.91■□□□□ 0.3
Clk3O35492 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Clk3O35492 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.91■□□□□ 0.3
Clk3O35492 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clk3O35492 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clk3O35492 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clk3O35492 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms