Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm27801-201ENSMUST00000184174 223 ntBASIC13.92□□□□□ -0.18
Tnfsf11O35235 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.92□□□□□ -0.18
Tnfsf11O35235 Gm43137-201ENSMUST00000198052 594 ntBASIC13.92□□□□□ -0.18
Tnfsf11O35235 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.92□□□□□ -0.18
Tnfsf11O35235 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.91□□□□□ -0.18
Tnfsf11O35235 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.91□□□□□ -0.18
Tnfsf11O35235 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf11O35235 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tnfsf11O35235 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfsf11O35235 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tnfsf11O35235 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.89□□□□□ -0.19
Tnfsf11O35235 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf11O35235 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.88□□□□□ -0.19
Tnfsf11O35235 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf11O35235 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms