Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm21788J3QNH3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.07■□□□□ 0
Gm21788J3QNH3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm21788J3QNH3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.06■□□□□ 0
Gm21788J3QNH3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm21788J3QNH3 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.06■□□□□ 0
Gm21788J3QNH3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.05■□□□□ 0
Gm21788J3QNH3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm21788J3QNH3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm21788J3QNH3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Gm21788J3QNH3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Gm21788J3QNH3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.05■□□□□ -0
Gm21788J3QNH3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.05■□□□□ -0
Gm21788J3QNH3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
Gm21788J3QNH3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.05■□□□□ -0
Gm21788J3QNH3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.05■□□□□ -0
Gm21788J3QNH3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm21788J3QNH3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gm21788J3QNH3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Gm10849-201ENSMUST00000100397 618 ntBASIC15.04■□□□□ -0
Gm21788J3QNH3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.04■□□□□ -0
Gm21788J3QNH3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.04■□□□□ -0
Gm21788J3QNH3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm21788J3QNH3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.03■□□□□ -0
Gm21788J3QNH3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Gm6211-202ENSMUST00000167849 925 ntBASIC15.03■□□□□ -0
Gm21788J3QNH3 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.03■□□□□ -0
Gm21788J3QNH3 Gm42569-201ENSMUST00000200539 472 ntBASIC15.03■□□□□ -0
Gm21788J3QNH3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.03■□□□□ -0
Gm21788J3QNH3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Gm21788J3QNH3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.03■□□□□ -0
Gm21788J3QNH3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm21788J3QNH3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.02■□□□□ -0
Gm21788J3QNH3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Gm21788J3QNH3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.02■□□□□ -0
Gm21788J3QNH3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
Gm21788J3QNH3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm21788J3QNH3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.02■□□□□ -0
Gm21788J3QNH3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.02■□□□□ -0
Gm21788J3QNH3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.02■□□□□ -0
Gm21788J3QNH3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.02■□□□□ -0
Gm21788J3QNH3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm21788J3QNH3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.02□□□□□ -0.01
Gm21788J3QNH3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm21788J3QNH3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gm21788J3QNH3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms