Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh17E9PXF0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdh17E9PXF0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm37292-201ENSMUST00000192062 758 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm5417-201ENSMUST00000079706 384 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh17E9PXF0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh17E9PXF0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh17E9PXF0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh17E9PXF0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh17E9PXF0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms