Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Gm11421-201ENSMUST00000122124 294 ntBASIC11.3□□□□□ -0.6
Gm10320E9PW43 Smad6-203ENSMUST00000179458 273 ntBASIC11.3□□□□□ -0.6
Gm10320E9PW43 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.3□□□□□ -0.6
Gm10320E9PW43 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10320E9PW43 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gm10320E9PW43 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10320E9PW43 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10320E9PW43 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10320E9PW43 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Gm10320E9PW43 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm10320E9PW43 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.27□□□□□ -0.61
Gm10320E9PW43 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10320E9PW43 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms