Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-1A0N8R1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-1A0N8R1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-1A0N8R1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-1A0N8R1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Gm7514-201ENSMUST00000209475 934 ntBASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-1A0N8R1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav12-1A0N8R1 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms