Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm10418-201ENSMUST00000100943 576 ntBASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm11643-201ENSMUST00000119578 864 ntBASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.81■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm6576-201ENSMUST00000169678 883 ntBASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mindy4b-psA0A1W2P7H6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mindy4b-psA0A1W2P7H6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms