Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm10013-201ENSMUST00000106074 672 ntBASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm3854A0A1B0GSS6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm4974-201ENSMUST00000209974 875 ntBASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm3854A0A1B0GSS6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.83■□□□□ 0.45
Gm3854A0A1B0GSS6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm3854A0A1B0GSS6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 AA414768-201ENSMUST00000121924 1257 ntBASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm3854A0A1B0GSS6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm3854A0A1B0GSS6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm3854A0A1B0GSS6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3854A0A1B0GSS6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms