Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Serp2-204ENSMUST00000228055 705 ntBASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv8-30A0A140T8M3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Igkv8-30A0A140T8M3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv8-30A0A140T8M3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm9870-201ENSMUST00000063874 645 ntBASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-30A0A140T8M3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-30A0A140T8M3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-30A0A140T8M3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms