Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Mir5122-201ENSMUST00000175004 89 ntBASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm42545-201ENSMUST00000202755 922 ntBASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm10252-201ENSMUST00000209541 832 ntBASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn2aA0A0J9YTW6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn2aA0A0J9YTW6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn2aA0A0J9YTW6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm37292-201ENSMUST00000192062 758 ntBASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.33■□□□□ 0.21
Scn2aA0A0J9YTW6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn2aA0A0J9YTW6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.32■□□□□ 0.2
Scn2aA0A0J9YTW6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Gm6576-201ENSMUST00000169678 883 ntBASIC16.31■□□□□ 0.2
Scn2aA0A0J9YTW6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms