Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6365-201ENSMUST00000054711 744 ntBASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7291-201ENSMUST00000199147 382 ntBASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7290-201ENSMUST00000104990 617 ntBASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12918-201ENSMUST00000120234 636 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms