Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13n-4A0A0G2JG01 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-4A0A0G2JG01 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-4A0A0G2JG01 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Rab3c-203ENSMUST00000224180 967 ntBASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13n-4A0A0G2JG01 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm26524-201ENSMUST00000192339 390 ntBASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13n-4A0A0G2JG01 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13n-4A0A0G2JG01 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13n-4A0A0G2JG01 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms