Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Reep4-203ENSMUST00000226563 1444 ntBASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-4A0A0G2JFX3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms