Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Gm9847-201ENSMUST00000052528 599 ntBASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3n-3A0A0G2JEM0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms