Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav4-3A0A0B4J1K1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-3A0A0B4J1K1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-3A0A0B4J1K1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm7417-201ENSMUST00000192950 473 ntBASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-3A0A0B4J1K1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-3A0A0B4J1K1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms