Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv13-3A0A0B4J1H2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm22238-201ENSMUST00000175222 88 ntBASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv13-3A0A0B4J1H2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms