Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm13534-201ENSMUST00000121169 513 ntBASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.61□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm18671-201ENSMUST00000214826 683 ntBASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.6□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.59□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ighv1-11A0A0A6YWI9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ighv1-11A0A0A6YWI9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ighv1-11A0A0A6YWI9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ighv1-11A0A0A6YWI9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ighv1-11A0A0A6YWI9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms