Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Gm6420-201ENSMUST00000193885 723 ntBASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-7A0A075B6B0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-7A0A075B6B0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6d-7A0A075B6B0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-7A0A075B6B0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Nespas-201ENSMUST00000143738 1083 ntBASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-7A0A075B6B0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm13534-201ENSMUST00000121169 513 ntBASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm5408-201ENSMUST00000197998 747 ntBASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-7A0A075B6B0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-7A0A075B6B0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-7A0A075B6B0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms