Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6n-7A0A075B6A6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm13158-201ENSMUST00000122007 736 ntBASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-7A0A075B6A6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-7A0A075B6A6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm20760-201ENSMUST00000179197 648 ntBASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm10138-203ENSMUST00000206952 366 ntBASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.12■□□□□ 0.01
Trav6n-7A0A075B6A6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Gm27011-201ENSMUST00000182352 972 ntBASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Grk6-206ENSMUST00000224995 2971 ntBASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-7A0A075B6A6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms