Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.19□□□□□ -0.14
Trav17A0A075B655 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.19□□□□□ -0.14
Trav17A0A075B655 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav17A0A075B655 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav17A0A075B655 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Gm12821-201ENSMUST00000120022 600 ntBASIC14.17□□□□□ -0.14
Trav17A0A075B655 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav17A0A075B655 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav17A0A075B655 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms