Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6n-5A0A075B621 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6n-5A0A075B621 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6n-5A0A075B621 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6n-5A0A075B621 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6n-5A0A075B621 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Gm15820-201ENSMUST00000201566 728 ntBASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6n-5A0A075B621 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6n-5A0A075B621 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6n-5A0A075B621 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Idnk-204ENSMUST00000226010 1898 ntBASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Golgb1-201ENSMUST00000023534 498 ntBASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6n-5A0A075B621 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms