Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4n-4A0A075B615 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4n-4A0A075B615 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav4n-4A0A075B615 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.4□□□□□ -0.43
Trav4n-4A0A075B615 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4n-4A0A075B615 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4n-4A0A075B615 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Trav4n-4A0A075B615 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav4n-4A0A075B615 Gm13216-201ENSMUST00000117145 591 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms