Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Gm11249-201ENSMUST00000117071 859 ntBASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-1A0A075B606 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav13d-1A0A075B606 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Flg-201ENSMUST00000050758 1488 ntBASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Gm5643-201ENSMUST00000117081 966 ntBASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-1A0A075B606 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Gm10252-201ENSMUST00000209541 832 ntBASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-1A0A075B606 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-1A0A075B606 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms