Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm24886-201ENSMUST00000104384 123 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm11212-201ENSMUST00000118337 618 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm15233-201ENSMUST00000118747 400 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm13473-201ENSMUST00000119289 367 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm5405-201ENSMUST00000120478 609 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm26372-201ENSMUST00000157831 236 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm25227-201ENSMUST00000158204 112 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Mir3572-201ENSMUST00000175549 86 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm4832-201ENSMUST00000182679 399 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm26970-201ENSMUST00000182990 964 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm37700-201ENSMUST00000192617 965 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm37719-201ENSMUST00000194615 292 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm10709-201ENSMUST00000213318 480 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm18996-201ENSMUST00000214851 755 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm23795-201ENSMUST00000084006 137 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.22□□□□□ -1.57
Trim3Q9R1R2 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim3Q9R1R2 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Trim3Q9R1R2 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Trim3Q9R1R2 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Trim3Q9R1R2 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm16394-201ENSMUST00000117289 675 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm9208-201ENSMUST00000120468 948 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm7309-201ENSMUST00000121670 581 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm23669-201ENSMUST00000157470 128 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm24692-201ENSMUST00000157761 146 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm20401-201ENSMUST00000173717 212 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm29161-201ENSMUST00000188250 699 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Mir219c-201ENSMUST00000199860 60 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm43456-201ENSMUST00000202519 457 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm18205-201ENSMUST00000209215 841 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm31166-201ENSMUST00000209326 288 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm4822-201ENSMUST00000077551 479 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 AW046200-203ENSMUST00000211787 2479 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim3Q9R1R2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim3Q9R1R2 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms