Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ube3bQ9ES34 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ube3bQ9ES34 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm13265-201ENSMUST00000118090 421 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm14897-201ENSMUST00000118213 207 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm14972-201ENSMUST00000121780 364 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm24781-201ENSMUST00000157636 117 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm20454-201ENSMUST00000172713 221 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm6061-201ENSMUST00000175860 492 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm27313-201ENSMUST00000183500 142 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm28023-201ENSMUST00000184556 60 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm27825-201ENSMUST00000184586 60 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm8296-201ENSMUST00000185597 524 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm45874-201ENSMUST00000212423 346 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 AC148328.2-201ENSMUST00000216960 262 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 AC154755.1-201ENSMUST00000225244 537 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm25401-201ENSMUST00000082975 106 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm25141-201ENSMUST00000083177 107 ntBASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ube3bQ9ES34 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 AC167192.3-201ENSMUST00000224096 1567 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 AC163660.3-201ENSMUST00000224253 1563 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm43990-201ENSMUST00000203790 1691 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm25785-201ENSMUST00000104129 125 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm5319-201ENSMUST00000118965 873 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm15791-201ENSMUST00000120365 319 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm12041-201ENSMUST00000121606 602 ntBASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ube3bQ9ES34 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms