Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm28385-201ENSMUST00000185671 292 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm9687-201ENSMUST00000189312 602 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm43157-201ENSMUST00000198223 412 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 AC154755.2-201ENSMUST00000224384 2857 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm37304-201ENSMUST00000193833 2886 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 AC154630.1-201ENSMUST00000215334 2440 ntBASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC4.86□□□□□ -1.63
Col6a6Q8C6K9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm15168-201ENSMUST00000121057 316 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Mir1907-201ENSMUST00000122509 90 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm27551-201ENSMUST00000184258 77 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm25139-201ENSMUST00000083247 210 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm20453-201ENSMUST00000173968 226 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm4714-201ENSMUST00000203395 279 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a6Q8C6K9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm23993-201ENSMUST00000157478 144 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm26170-201ENSMUST00000158419 148 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm23023-201ENSMUST00000158767 109 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm37445-201ENSMUST00000195318 242 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm42643-201ENSMUST00000200504 279 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm44673-201ENSMUST00000205692 996 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm6362-201ENSMUST00000217686 836 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 AC091783.3-201ENSMUST00000223969 681 ntBASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a6Q8C6K9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms