Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm12633-201ENSMUST00000117742 1705 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.61□□□□□ -1.19
Usp47Q8BY87 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Usp47Q8BY87 Gm22273-201ENSMUST00000104040 132 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm14175-201ENSMUST00000119835 241 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm13738-201ENSMUST00000122437 469 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 n-R5s174-201ENSMUST00000122638 121 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm25865-201ENSMUST00000158247 104 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm45660-201ENSMUST00000210267 151 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp47Q8BY87 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp47Q8BY87 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Gm38137-201ENSMUST00000193735 1401 ntBASIC7.6□□□□□ -1.19
Usp47Q8BY87 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp47Q8BY87 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Mir6412-201ENSMUST00000184477 97 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm27781-201ENSMUST00000185185 92 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm45422-201ENSMUST00000211476 246 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Gm4822-201ENSMUST00000077551 479 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp47Q8BY87 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Usp47Q8BY87 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.59□□□□□ -1.19
Usp47Q8BY87 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Usp47Q8BY87 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Gm24186-201ENSMUST00000157983 127 ntBASIC7.59□□□□□ -1.2
Usp47Q8BY87 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Gm3148-201ENSMUST00000203594 612 ntBASIC7.59□□□□□ -1.2
Usp47Q8BY87 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.59□□□□□ -1.2
Usp47Q8BY87 Gm18904-201ENSMUST00000218756 329 ntBASIC7.59□□□□□ -1.2
Usp47Q8BY87 Gm19189-201ENSMUST00000221689 754 ntBASIC7.59□□□□□ -1.2
Usp47Q8BY87 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC7.59□□□□□ -1.2
Usp47Q8BY87 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm23593-201ENSMUST00000104309 120 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm12422-201ENSMUST00000121431 302 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm23546-201ENSMUST00000158211 137 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm22355-201ENSMUST00000175531 96 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm37719-201ENSMUST00000194615 292 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm42542-201ENSMUST00000197978 268 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC7.58□□□□□ -1.2
Usp47Q8BY87 AC153840.1-201ENSMUST00000219685 313 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Zfp429-203ENSMUST00000224684 524 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 AC154239.1-201ENSMUST00000228565 406 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Gm23972-201ENSMUST00000083322 165 ntBASIC7.58□□□□□ -1.2
Usp47Q8BY87 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Usp47Q8BY87 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Usp47Q8BY87 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Usp47Q8BY87 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms