Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Upf3bQ3ULL6 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm23910-201ENSMUST00000104597 132 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm8061-201ENSMUST00000122380 350 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm26211-201ENSMUST00000158578 129 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm5946-201ENSMUST00000182340 970 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm2914-201ENSMUST00000186120 328 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28943-201ENSMUST00000186187 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28736-201ENSMUST00000186257 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm29401-201ENSMUST00000186690 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm29178-204ENSMUST00000186784 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28589-201ENSMUST00000186991 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28936-201ENSMUST00000187153 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm29121-201ENSMUST00000187611 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28243-201ENSMUST00000187801 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28844-202ENSMUST00000187977 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm29058-201ENSMUST00000189510 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm29624-201ENSMUST00000190018 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28780-201ENSMUST00000190223 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28969-211ENSMUST00000190992 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm28990-207ENSMUST00000191219 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm36468-201ENSMUST00000192119 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm31572-201ENSMUST00000193341 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm30175-201ENSMUST00000194173 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm30858-201ENSMUST00000195516 615 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm44214-201ENSMUST00000204153 606 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm45343-201ENSMUST00000210452 828 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Gm45874-201ENSMUST00000212423 346 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Snora30-201ENSMUST00000083325 130 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Upf3bQ3ULL6 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm26300-201ENSMUST00000102282 94 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm8582-201ENSMUST00000164061 789 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm28149-201ENSMUST00000187102 378 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm28768-201ENSMUST00000189034 378 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Gm18969-201ENSMUST00000189423 730 ntBASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Upf3bQ3ULL6 Mir6516-201ENSMUST00000196236 110 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms