Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm4332-201ENSMUST00000196114 346 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm44316-201ENSMUST00000199274 97 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.13□□□□□ -1.59
Scn1bP97952 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm44163-201ENSMUST00000205140 475 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm44279-201ENSMUST00000205154 472 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm30646-201ENSMUST00000207662 180 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Gm45610-201ENSMUST00000209227 784 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.13□□□□□ -1.59
Scn1bP97952 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.13□□□□□ -1.59
Scn1bP97952 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm25739-201ENSMUST00000082886 107 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Mir7b-201ENSMUST00000083557 111 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scn1bP97952 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scn1bP97952 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Scn1bP97952 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.13□□□□□ -1.59
Scn1bP97952 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm649-201ENSMUST00000117284 1054 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm15181-201ENSMUST00000120142 177 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm14531-201ENSMUST00000120845 285 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm25782-201ENSMUST00000122526 289 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm3160-201ENSMUST00000128343 607 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.12□□□□□ -1.59
Scn1bP97952 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm15508-201ENSMUST00000160330 325 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm16297-201ENSMUST00000161466 459 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Scn1bP97952 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Scn1bP97952 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm26557-201ENSMUST00000180756 493 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Mir7058-201ENSMUST00000184637 75 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.12□□□□□ -1.59
Scn1bP97952 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm37005-201ENSMUST00000193281 1164 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm37659-201ENSMUST00000194574 111 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm19080-201ENSMUST00000196082 550 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm42428-201ENSMUST00000198677 302 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm43033-201ENSMUST00000199682 425 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm17834-201ENSMUST00000204322 891 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm8319-201ENSMUST00000205708 641 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm45474-201ENSMUST00000209471 408 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm8748-201ENSMUST00000211125 587 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.12□□□□□ -1.59
Scn1bP97952 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.12□□□□□ -1.59
Scn1bP97952 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm24041-201ENSMUST00000083115 156 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Scn1bP97952 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.12□□□□□ -1.59
Scn1bP97952 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scn1bP97952 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scn1bP97952 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms