Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.15□□□□□ -1.42
Col2a1P28481 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Col2a1P28481 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col2a1P28481 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
Col2a1P28481 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col2a1P28481 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col2a1P28481 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col2a1P28481 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col2a1P28481 Gm14125-202ENSMUST00000120921 756 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Gm22160-201ENSMUST00000158405 328 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col2a1P28481 Gm9238-201ENSMUST00000196181 329 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Gm4321-201ENSMUST00000200520 442 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Gm9038-201ENSMUST00000203400 604 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.15□□□□□ -1.43
Col2a1P28481 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.15□□□□□ -1.43
Col2a1P28481 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col2a1P28481 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col2a1P28481 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col2a1P28481 Gm15480-201ENSMUST00000120442 519 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Gm7973-201ENSMUST00000122107 488 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Gm5353-201ENSMUST00000139800 793 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col2a1P28481 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.14□□□□□ -1.43
Col2a1P28481 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.14□□□□□ -1.43
Col2a1P28481 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col2a1P28481 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.14□□□□□ -1.43
Col2a1P28481 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col2a1P28481 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 AC133076.2-201ENSMUST00000227678 3532 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm23593-201ENSMUST00000104309 120 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm12413-201ENSMUST00000121508 312 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Gm13077-201ENSMUST00000121941 484 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Gm23700-201ENSMUST00000158842 102 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm19739-201ENSMUST00000195941 153 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 Olfr151-202ENSMUST00000221099 929 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Gm19786-201ENSMUST00000222589 580 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Gm4963-201ENSMUST00000072718 378 ntBASIC6.13□□□□□ -1.43
Col2a1P28481 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Col2a1P28481 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Col2a1P28481 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col2a1P28481 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.12□□□□□ -1.43
Col2a1P28481 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.12□□□□□ -1.43
Col2a1P28481 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col2a1P28481 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms