Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.6□□□□□ -1.67
Cdx1P18111 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.6□□□□□ -1.67
Cdx1P18111 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cdx1P18111 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm25917-201ENSMUST00000104267 130 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
Cdx1P18111 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm22952-201ENSMUST00000116720 120 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm12261-201ENSMUST00000117499 645 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm14539-201ENSMUST00000117527 174 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm13114-201ENSMUST00000117605 106 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm15366-201ENSMUST00000118433 1019 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm8317-201ENSMUST00000121261 471 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm9428-201ENSMUST00000127214 769 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm25846-201ENSMUST00000158013 135 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm24733-201ENSMUST00000158863 253 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm10087-201ENSMUST00000167650 330 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm27854-201ENSMUST00000175578 244 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx1P18111 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Ighv5-3-201ENSMUST00000195336 322 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC4.59□□□□□ -1.67
Cdx1P18111 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm42990-201ENSMUST00000199231 312 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Cdx1P18111 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm44312-201ENSMUST00000203536 469 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm44239-201ENSMUST00000204228 271 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm45127-201ENSMUST00000205984 1015 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm44845-201ENSMUST00000208773 335 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.59□□□□□ -1.67
Cdx1P18111 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm6906-201ENSMUST00000218014 569 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.59□□□□□ -1.67
Cdx1P18111 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 AC154634.2-201ENSMUST00000225983 1184 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 AC133203.2-201ENSMUST00000226709 464 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Cdx1P18111 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cdx1P18111 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Gm6104-201ENSMUST00000078030 603 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Gm24454-201ENSMUST00000083349 132 ntBASIC4.59□□□□□ -1.67
Cdx1P18111 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cdx1P18111 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cdx1P18111 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdx1P18111 AC151904.1-201ENSMUST00000219945 1498 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm9427-201ENSMUST00000116187 651 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm14938-201ENSMUST00000119482 943 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm7189-201ENSMUST00000119811 429 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.58□□□□□ -1.68
Cdx1P18111 Gm14716-201ENSMUST00000120138 718 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms